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hyperiax 3.0
hyperiax 3.0

Tutorials

  • Tutorials
    • Quickstart — Hyperiax in five minutes
    • Writing your own sweeps
    • Phylogenetic mean on a real tree
    • Bayesian phylogenetic inference with discrete BFFG
    • Gaussian MCMC — BFFG with a hand-rolled kernel
    • Gaussian NUTS — and what its existence proves
    • Shape inference — Kunita flows with non-linear transitions

API reference

  • API reference
    • hyperiax.Topology
    • hyperiax.Tree
    • hyperiax.Schema
    • hyperiax.FieldSpec
    • hyperiax.SweepFn
    • hyperiax.Node
    • hyperiax.Children
    • hyperiax.ChildrenAxis
    • hyperiax.up
    • hyperiax.down
    • hyperiax.symmetric_topology
    • hyperiax.from_parents
    • hyperiax.from_newick
    • hyperiax.to_newick
    • hyperiax.HyperiaxError
    • hyperiax.MissingField
    • hyperiax.SchemaMismatch
    • hyperiax.prebuilt.phylo_mean
    • hyperiax.prebuilt.bffg.discrete_schema
    • hyperiax.prebuilt.bffg.init_discrete_tree
    • hyperiax.prebuilt.bffg.discrete_bf_sweep
    • hyperiax.prebuilt.bffg.discrete_forward_sweep
    • hyperiax.prebuilt.bffg.discrete_fg_sweep
    • hyperiax.prebuilt.bffg.discrete_refine_anchor
    • hyperiax.prebuilt.bffg.continuous_schema
    • hyperiax.prebuilt.bffg.init_continuous_tree
    • hyperiax.prebuilt.bffg.continuous_bf_sweep
    • hyperiax.prebuilt.bffg.continuous_forward_sweep
    • hyperiax.prebuilt.bffg.continuous_fg_sweep
    • hyperiax.prebuilt.bffg.continuous_refine_anchor
    • hyperiax.prebuilt.bffg.propagate_linearization
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hyperiax.from_parents¶

hyperiax.from_parents(parents, *, names=None)[source]¶

Thin re-export of Topology.from_parents().

Return type:

Topology

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  • hyperiax.from_parents
    • from_parents()