Index _ | A | C | D | E | F | H | I | L | M | N | P | R | S | T | U | W _ __init__() (hyperiax.Children method) (hyperiax.ChildrenAxis method) (hyperiax.FieldSpec method) (hyperiax.Node method) (hyperiax.Schema method) (hyperiax.SweepFn method) (hyperiax.Topology method) (hyperiax.Tree method) A at (hyperiax.Tree property) C child_counts (hyperiax.Topology attribute) Children (class in hyperiax) ChildrenAxis (class in hyperiax) continuous_bf_sweep() (in module hyperiax.prebuilt.bffg) continuous_fg_sweep() (in module hyperiax.prebuilt.bffg) continuous_forward_sweep() (in module hyperiax.prebuilt.bffg) continuous_refine_anchor() (in module hyperiax.prebuilt.bffg) continuous_schema() (in module hyperiax.prebuilt.bffg) D data (hyperiax.Tree attribute) depth (hyperiax.Topology attribute) direction (hyperiax.SweepFn attribute) discrete_bf_sweep() (in module hyperiax.prebuilt.bffg) discrete_fg_sweep() (in module hyperiax.prebuilt.bffg) discrete_forward_sweep() (in module hyperiax.prebuilt.bffg) discrete_refine_anchor() (in module hyperiax.prebuilt.bffg) discrete_schema() (in module hyperiax.prebuilt.bffg) down() (in module hyperiax) drop() (hyperiax.Tree method) dtype (hyperiax.FieldSpec attribute) E empty() (hyperiax.Tree class method) equal_degree (hyperiax.Topology attribute) F fields (hyperiax.Schema attribute) FieldSpec (class in hyperiax) flat (hyperiax.ChildrenAxis property) fn (hyperiax.SweepFn attribute) from_data() (hyperiax.Tree class method) from_dict() (hyperiax.Schema class method) from_newick() (in module hyperiax) from_parents() (hyperiax.Topology class method) (in module hyperiax) H HyperiaxError I init_continuous_tree() (in module hyperiax.prebuilt.bffg) init_discrete_tree() (in module hyperiax.prebuilt.bffg) is_inner (hyperiax.Topology attribute) is_leaf (hyperiax.Topology attribute) is_root (hyperiax.Topology attribute) L level_starts (hyperiax.Topology attribute) M map() (hyperiax.Children method) max() (hyperiax.ChildrenAxis method) max_degree (hyperiax.Topology attribute) mean() (hyperiax.ChildrenAxis method) min() (hyperiax.ChildrenAxis method) MissingField N names (hyperiax.Schema property) (hyperiax.Topology attribute) Node (class in hyperiax) node_depths (hyperiax.Topology attribute) P parents (hyperiax.Topology attribute) pbuckets (hyperiax.Topology attribute) pbuckets_ref (hyperiax.Topology attribute) phylo_mean() (in module hyperiax.prebuilt) prod() (hyperiax.ChildrenAxis method) propagate_linearization() (in module hyperiax.prebuilt.bffg) R reads (hyperiax.SweepFn attribute) reads_children (hyperiax.SweepFn attribute) reads_parent (hyperiax.SweepFn attribute) S Schema (class in hyperiax) schema (hyperiax.Tree attribute) SchemaMismatch set() (hyperiax.Tree method) shape (hyperiax.FieldSpec attribute) size (hyperiax.Topology attribute) (hyperiax.Tree property) sum() (hyperiax.ChildrenAxis method) SweepFn (class in hyperiax) symmetric_topology() (in module hyperiax) T to_newick() (in module hyperiax) Topology (class in hyperiax) topology (hyperiax.Tree attribute) Tree (class in hyperiax) U up() (in module hyperiax) update() (hyperiax.Tree method) W with_added() (hyperiax.Schema method) without() (hyperiax.Schema method) writes (hyperiax.SweepFn attribute) writes_children (hyperiax.SweepFn attribute)