Index

A

add_property() (hyperiax.tree.tree.HypTree method)

B

BaseModel (class in hyperiax.models.basemodel)

C

children (hyperiax.tree.tree.TopologyNode attribute)

D

down() (hyperiax.models.updownmodel.DownModel method)

DownModel (class in hyperiax.models.updownmodel)

F

FastBiTree (class in hyperiax.tree.tree)

FixedParameter (class in hyperiax.mcmc.fixedparameter)

H

hyperiax.mcmc.fixedparameter module hyperiax.mcmc.parameter module hyperiax.mcmc.parameterstore module hyperiax.models.basemodel module

hyperiax.models.updownmodel module hyperiax.tree module hyperiax.tree.tree module HypTree (class in hyperiax.tree.tree)

I

iter_topology_bfs() (hyperiax.tree.tree.HypTree method) iter_topology_dfs() (hyperiax.tree.tree.HypTree method) iter_topology_leaves_bfs() (hyperiax.tree.tree.HypTree method)

iter_topology_leaves_dfs() (hyperiax.tree.tree.HypTree method) iter_topology_levels() (hyperiax.tree.tree.HypTree method) iter_topology_post() (hyperiax.tree.tree.HypTree method)

L

log_prior() (hyperiax.mcmc.fixedparameter.FixedParameter method) (hyperiax.mcmc.parameter.Parameter method) (hyperiax.mcmc.parameterstore.ParameterStore method)

M

module hyperiax.mcmc.fixedparameter hyperiax.mcmc.parameter hyperiax.mcmc.parameterstore hyperiax.models.basemodel hyperiax.models.updownmodel hyperiax.tree hyperiax.tree.tree tree

N

name (hyperiax.tree.tree.TopologyNode attribute)

P

Parameter (class in hyperiax.mcmc.parameter) ParameterStore (class in hyperiax.mcmc.parameterstore) parent (hyperiax.tree.tree.TopologyNode attribute)

propose() (hyperiax.mcmc.fixedparameter.FixedParameter method) (hyperiax.mcmc.parameter.Parameter method) (hyperiax.mcmc.parameterstore.ParameterStore method)

R

ReducerModel (class in hyperiax.models.basemodel)

T

TopologyNode (class in hyperiax.tree.tree) transform() (hyperiax.models.updownmodel.UpReducer method)

tree module TreeField (class in hyperiax.tree.tree)

U

up() (hyperiax.models.updownmodel.UpModel method) (hyperiax.models.updownmodel.UpReducer method) update() (hyperiax.mcmc.fixedparameter.FixedParameter method) (hyperiax.mcmc.parameter.Parameter method)

UpModel (class in hyperiax.models.updownmodel) UpReducer (class in hyperiax.models.updownmodel)

V

values() (hyperiax.mcmc.parameterstore.ParameterStore method)